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epic microarray dna methylation dataset  (Illumina Inc)


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    Illumina Inc epic microarray dna methylation dataset
    Low-dimensional representation of variable <t>DNA</t> <t>methylation</t> sites across all placental and immune cell types and whole placental tissue samples shows samples cluster by cell type.
    Epic Microarray Dna Methylation Dataset, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/epic+microarray+dna+methylation+dataset/pmc11633140-134-25-28?v=Illumina+Inc
    Average 90 stars, based on 1 article reviews
    epic microarray dna methylation dataset - by Bioz Stars, 2026-07
    90/100 stars

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    1) Product Images from "Placental and immune cell DNA methylation reference panel for bulk tissue cell composition estimation in epidemiological studies"

    Article Title: Placental and immune cell DNA methylation reference panel for bulk tissue cell composition estimation in epidemiological studies

    Journal: Epigenetics

    doi: 10.1080/15592294.2024.2437275

    Low-dimensional representation of variable DNA methylation sites across all placental and immune cell types and whole placental tissue samples shows samples cluster by cell type.
    Figure Legend Snippet: Low-dimensional representation of variable DNA methylation sites across all placental and immune cell types and whole placental tissue samples shows samples cluster by cell type.

    Techniques Used: DNA Methylation Assay

    Analytic table of DNA methylation samples used for deconvolution reference.
    Figure Legend Snippet: Analytic table of DNA methylation samples used for deconvolution reference.

    Techniques Used: DNA Methylation Assay, Fluorescence

    Placental cell type differential DNA methylation. Volcano plots comparing site-specific DNA methylation levels in one cell type against the average across all other cell types.
    Figure Legend Snippet: Placental cell type differential DNA methylation. Volcano plots comparing site-specific DNA methylation levels in one cell type against the average across all other cell types.

    Techniques Used: DNA Methylation Assay

    Top differentially methylated sites unique to the five placental cell types (cytotrophoblast, endothelial, Hofbauer, stromal, and syncytiotrophoblast) and nucleated red blood cells with gene annotations reveal highly specific DNA methylation profiles by cell type.
    Figure Legend Snippet: Top differentially methylated sites unique to the five placental cell types (cytotrophoblast, endothelial, Hofbauer, stromal, and syncytiotrophoblast) and nucleated red blood cells with gene annotations reveal highly specific DNA methylation profiles by cell type.

    Techniques Used: Methylation, DNA Methylation Assay

    Summary graphs of the root mean square error of prediction in the ability to model principal components of DNA methylation in 204 placenta dataset GSE232778 for our expanded reference versus the existing reference implemented in planet from 1,000 repeats of a 10-fold cross-validation linear regression model with estimated cell composition as the predictor variables.
    Figure Legend Snippet: Summary graphs of the root mean square error of prediction in the ability to model principal components of DNA methylation in 204 placenta dataset GSE232778 for our expanded reference versus the existing reference implemented in planet from 1,000 repeats of a 10-fold cross-validation linear regression model with estimated cell composition as the predictor variables.

    Techniques Used: DNA Methylation Assay, Biomarker Discovery



    Similar Products

    epic microarray dna methylation dataset  (Illumina Inc)
    90
    Illumina Inc epic microarray dna methylation dataset
    Low-dimensional representation of variable <t>DNA</t> <t>methylation</t> sites across all placental and immune cell types and whole placental tissue samples shows samples cluster by cell type.
    Epic Microarray Dna Methylation Dataset, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/epic+microarray+dna+methylation+dataset/pmc11633140-134-25-28?v=Illumina+Inc
    Average 90 stars, based on 1 article reviews
    epic microarray dna methylation dataset - by Bioz Stars, 2026-07
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Low-dimensional representation of variable DNA methylation sites across all placental and immune cell types and whole placental tissue samples shows samples cluster by cell type.

    Journal: Epigenetics

    Article Title: Placental and immune cell DNA methylation reference panel for bulk tissue cell composition estimation in epidemiological studies

    doi: 10.1080/15592294.2024.2437275

    Figure Lengend Snippet: Low-dimensional representation of variable DNA methylation sites across all placental and immune cell types and whole placental tissue samples shows samples cluster by cell type.

    Article Snippet: To assess the performance of our placental DNA methylation deconvolution reference, we compared its ability to predict DNA methylation variation [ ] in a preprocessed placental whole tissue Illumina EPIC microarray DNA methylation dataset comprising 204 placentas across three cohorts (GEO accession number GSE232778) [ ] against the only existing multi-cell type reference [ ].

    Techniques: DNA Methylation Assay

    Analytic table of DNA methylation samples used for deconvolution reference.

    Journal: Epigenetics

    Article Title: Placental and immune cell DNA methylation reference panel for bulk tissue cell composition estimation in epidemiological studies

    doi: 10.1080/15592294.2024.2437275

    Figure Lengend Snippet: Analytic table of DNA methylation samples used for deconvolution reference.

    Article Snippet: To assess the performance of our placental DNA methylation deconvolution reference, we compared its ability to predict DNA methylation variation [ ] in a preprocessed placental whole tissue Illumina EPIC microarray DNA methylation dataset comprising 204 placentas across three cohorts (GEO accession number GSE232778) [ ] against the only existing multi-cell type reference [ ].

    Techniques: DNA Methylation Assay, Fluorescence

    Placental cell type differential DNA methylation. Volcano plots comparing site-specific DNA methylation levels in one cell type against the average across all other cell types.

    Journal: Epigenetics

    Article Title: Placental and immune cell DNA methylation reference panel for bulk tissue cell composition estimation in epidemiological studies

    doi: 10.1080/15592294.2024.2437275

    Figure Lengend Snippet: Placental cell type differential DNA methylation. Volcano plots comparing site-specific DNA methylation levels in one cell type against the average across all other cell types.

    Article Snippet: To assess the performance of our placental DNA methylation deconvolution reference, we compared its ability to predict DNA methylation variation [ ] in a preprocessed placental whole tissue Illumina EPIC microarray DNA methylation dataset comprising 204 placentas across three cohorts (GEO accession number GSE232778) [ ] against the only existing multi-cell type reference [ ].

    Techniques: DNA Methylation Assay

    Top differentially methylated sites unique to the five placental cell types (cytotrophoblast, endothelial, Hofbauer, stromal, and syncytiotrophoblast) and nucleated red blood cells with gene annotations reveal highly specific DNA methylation profiles by cell type.

    Journal: Epigenetics

    Article Title: Placental and immune cell DNA methylation reference panel for bulk tissue cell composition estimation in epidemiological studies

    doi: 10.1080/15592294.2024.2437275

    Figure Lengend Snippet: Top differentially methylated sites unique to the five placental cell types (cytotrophoblast, endothelial, Hofbauer, stromal, and syncytiotrophoblast) and nucleated red blood cells with gene annotations reveal highly specific DNA methylation profiles by cell type.

    Article Snippet: To assess the performance of our placental DNA methylation deconvolution reference, we compared its ability to predict DNA methylation variation [ ] in a preprocessed placental whole tissue Illumina EPIC microarray DNA methylation dataset comprising 204 placentas across three cohorts (GEO accession number GSE232778) [ ] against the only existing multi-cell type reference [ ].

    Techniques: Methylation, DNA Methylation Assay

    Summary graphs of the root mean square error of prediction in the ability to model principal components of DNA methylation in 204 placenta dataset GSE232778 for our expanded reference versus the existing reference implemented in planet from 1,000 repeats of a 10-fold cross-validation linear regression model with estimated cell composition as the predictor variables.

    Journal: Epigenetics

    Article Title: Placental and immune cell DNA methylation reference panel for bulk tissue cell composition estimation in epidemiological studies

    doi: 10.1080/15592294.2024.2437275

    Figure Lengend Snippet: Summary graphs of the root mean square error of prediction in the ability to model principal components of DNA methylation in 204 placenta dataset GSE232778 for our expanded reference versus the existing reference implemented in planet from 1,000 repeats of a 10-fold cross-validation linear regression model with estimated cell composition as the predictor variables.

    Article Snippet: To assess the performance of our placental DNA methylation deconvolution reference, we compared its ability to predict DNA methylation variation [ ] in a preprocessed placental whole tissue Illumina EPIC microarray DNA methylation dataset comprising 204 placentas across three cohorts (GEO accession number GSE232778) [ ] against the only existing multi-cell type reference [ ].

    Techniques: DNA Methylation Assay, Biomarker Discovery